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ChatSpatial

Natural language-driven spatial transcriptomics analysis with 60+ methods via MCP

40 starsupdated 21d agogithub ↗
77fair
▣ Overview
PaperMLGenX @ ICLR 2026ENAR 2026IBC 2026CIPyPIPython 3.11-3.13License: MITDocsDocker
▣ Score BreakdownMCPScore = Σ(raw × weight)
DimensionRawWeighted
Security
35%
100
35.0
Freshness
25%
100
25.0
Adoption
20%
16
3.2
Quality
10%
90
9.0
Trust
10%
50
5.0
Total
77.2
⚿ Capabilities & Risk Explainer
fs readfs writenetworksecrets
◆ Risk level: medium
fs read + fs write + network + secrets — requires access to credentials or environment secrets.
⚙ Install config
Claude Desktop · Cursor · Windsurf · VS Code (Copilot) · Claude Code
add to your MCP client config:
{
  "mcpServers": {
    "chatspatial": {
      "command": "uvx",
      "args": [
        "chatspatial"
      ]
    }
  }
}
📈 Score historylast 33 snapshots
5/25/20267/6/2026 · 33 snapshots
⚙ Maintenance health
58/ 100 · is this project alive?
contributors (1y)2
top contributor share100%
releases (1y)13
last release6d ago
ci✓ passing
⛁ Raw data
weekly downloads0
github stars40
forks11
open issues13
license✓ present
readme length6264 chars
last publish1d ago
last commit21d ago
last updated12d ago
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